species:   Clros
pid:       PID2252
parent:    cro-mir-47
paralog:   a
locus:     CADEHS020000003.2:2806472-2806534
matures:   ['UUGCACUGACCUCUGGCGC', 'GUGGGCUCAGUCUCGGAAGG']
srr:       ERR5950791
genome:    /Users/jax/+Genomes/Fungal_genomes/Clros.GCA_902827195.2_C_rosea_IK726_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Piombo2021-ru.ERR5950791.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Piombo2021-ru.ERR5950791.cram CADEHS020000003.2:2806472-2806534

1 out of bounds
4 alignments
1 proper strand
1 stranded perfect matches

********************                      *********************
GUGGGCUCAGUCUCGGAAGGCGAAUCCGAAGAGUCGAUUUCGCCUUGCACUGACCUCUGGCGC
((.((.(((((...(.((((((((..(((....)))..)))))))).))))))...)).))..
--------------------------------------------UUGCACUGACCUCUGGCGC l=19 a=1 c
GUGGGCUCAGUCUCGGAAGG------------------------------------------- l=20 a=0 c*
--------------------------------------------UUGCACUGACCUCUGGCGC l=19 a=1 ma
GUGGGCUCAGUCUCGGAAGG------------------------------------------- l=20 a=0 ma*

--------------------------------------------UUGCACUGACCUCUGGCGC l=19 a=1 (c,ma)

mb-01011
ax-1001001
ku-01
ss-100010001100
fn-001
